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RTMet 0.1 documentation
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Table of Contents

  • Getting Started
    • Installation
    • Basic Tutorial
    • Configuring the workflow
  • User Guide
    • Controlling the workflow using Cylc GUI, TUI and CLI
    • Visualizing results with InfluxDB
    • Automating bioreactor sampling and analysis
    • Automating file transfers from the spectrometer
    • How to set up real-time monitoring
  • Reference
    • Workflow User Configuration
    • Results tables
    • Bioinformatics tasks
  • Development
    • Workflow design choices
    • Coding style
    • Adding a task to the workflow
    • Adding an item to user configuration
  • Glossary
  • Contributing
  • License
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Index

Symbols | C | E | F | R | S | T | W

Symbols

  • $PATH

C

  • cycle

E

  • environment variable
    • $PATH

F

  • FIA-HRMS
  • FIA-MS
  • FIE-MS
  • flowgram

R

  • run
  • run directory

S

  • source directory

T

  • task

W

  • workflow run
  • workflow source
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